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  • 2021년 04월호
    [Transl Oncol.] Genetic alterations associated with 18 F-fluorodeoxyglucose positron emission tomography/computed tomography in head and neck squamous cell carcinoma

    울산의대 / 한상원, 오정수*

  • 출처
    Transl Oncol.
  • 등재일
    2021 Feb
  • 저널이슈번호
    14(2):100988. doi: 10.1016/j.tranon.2020.100988. Epub 2020 Dec 20.
  • 내용

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    Abstract
    Background: We investigated the relationship between genetic alterations and 18F-FDG PET/CT findings in head and neck squamous cell carcinoma (HNSC).

    Methods: Using mRNA-sequences of HNSC samples (480 patients) from the Cancer Genome Atlas (TCGA) portal, gene coexpression networks were constructed via a weighted correlation network analysis (WGCNA) algorithm, and their association with the tumor-to-blood signal ratio on 18F-FDG PET/CT data (21 patients) was explored. An elastic-net regression model was developed to estimate the PET tumor-to-blood ratio from the gene networks and to derive an FDG signature score (FDGSS). The FDGSS was evaluated with regard to clinical variables and general mutational profiles, as well as alterations to oncogenic signaling pathways.

    Findings: The FDGSS values differed across clinical stages (p = 0.027), HPV-status (p< 0.001), and molecular subtypes of HNSC (p< 0.001). Multivariate Cox regression demonstrated that FDGSS was an independent predictor for overall (p = 0.019) and progression-free survival (p = 0.024). FDGSS positively correlated with total mutation rate (p = 0.016), aneuploidy (p < 0.001), and somatic copy number alteration scores (p < 0.001). CDKN2A in the cell cycle pathway (q = 0.014) and the TP53 gene in the TP53 pathway (q = 0.005) showed significant differences between high and low FDGSS patients.

    Conclusion: FDGSS based on the gene coexpression network was associated with the mutational landscape of HNSC. 18F-FDG PET/CT is therefore a valuable tool for the in vivo imaging of these cancers, being able to visualize the glucose metabolism of the tumor and allow inferences to be made on the underlying genetic alterations in the tumor.

     

     

    Affiliations

    Sangwon Han  1 , Jungsu S Oh  2 , Hyo Sang Lee  3 , Jae Seung Kim  1
    1 Department of Nuclear Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
    2 Department of Nuclear Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea. Electronic address: jungsu_oh@amc.seoul.kr.
    3 Department of Nuclear Medicine, Gangneung Asan Hospital, University of Ulsan College of Medicine, Gangneung, Korea.

  • 키워드
    Glycolysis; Machine learning; Mutation; Positron emission tomography computed tomography; Squamous cell carcinoma of head and neck.
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